14 research outputs found
S4ND: Single-Shot Single-Scale Lung Nodule Detection
The state of the art lung nodule detection studies rely on computationally
expensive multi-stage frameworks to detect nodules from CT scans. To address
this computational challenge and provide better performance, in this paper we
propose S4ND, a new deep learning based method for lung nodule detection. Our
approach uses a single feed forward pass of a single network for detection and
provides better performance when compared to the current literature. The whole
detection pipeline is designed as a single Convolutional Neural Network
(CNN) with dense connections, trained in an end-to-end manner. S4ND does not
require any further post-processing or user guidance to refine detection
results. Experimentally, we compared our network with the current
state-of-the-art object detection network (SSD) in computer vision as well as
the state-of-the-art published method for lung nodule detection (3D DCNN). We
used publically available CT scans from LUNA challenge dataset and showed
that the proposed method outperforms the current literature both in terms of
efficiency and accuracy by achieving an average FROC-score of . We also
provide an in-depth analysis of our proposed network to shed light on the
unclear paradigms of tiny object detection.Comment: Accepted for publication at MICCAI 2018 (21st International
Conference on Medical Image Computing and Computer Assisted Intervention
A Survey on Deep Learning in Medical Image Analysis
Deep learning algorithms, in particular convolutional networks, have rapidly
become a methodology of choice for analyzing medical images. This paper reviews
the major deep learning concepts pertinent to medical image analysis and
summarizes over 300 contributions to the field, most of which appeared in the
last year. We survey the use of deep learning for image classification, object
detection, segmentation, registration, and other tasks and provide concise
overviews of studies per application area. Open challenges and directions for
future research are discussed.Comment: Revised survey includes expanded discussion section and reworked
introductory section on common deep architectures. Added missed papers from
before Feb 1st 201
Towards automatic pulmonary nodule management in lung cancer screening with deep learning
The introduction of lung cancer screening programs will produce an
unprecedented amount of chest CT scans in the near future, which radiologists
will have to read in order to decide on a patient follow-up strategy. According
to the current guidelines, the workup of screen-detected nodules strongly
relies on nodule size and nodule type. In this paper, we present a deep
learning system based on multi-stream multi-scale convolutional networks, which
automatically classifies all nodule types relevant for nodule workup. The
system processes raw CT data containing a nodule without the need for any
additional information such as nodule segmentation or nodule size and learns a
representation of 3D data by analyzing an arbitrary number of 2D views of a
given nodule. The deep learning system was trained with data from the Italian
MILD screening trial and validated on an independent set of data from the
Danish DLCST screening trial. We analyze the advantage of processing nodules at
multiple scales with a multi-stream convolutional network architecture, and we
show that the proposed deep learning system achieves performance at classifying
nodule type that surpasses the one of classical machine learning approaches and
is within the inter-observer variability among four experienced human
observers.Comment: Published on Scientific Report
Validation, comparison, and combination of algorithms for automatic detection of pulmonary nodules in computed tomography images: The LUNA16 challenge
Automatic detection of pulmonary nodules in thoracic computed tomography (CT) scans has been an active area of research for the last two decades. However, there have only been few studies that provide a comparative performance evaluation of different systems on a common database. We have therefore set up the LUNA16 challenge, an objective evaluation framework for automatic nodule detection algorithms using the largest publicly available reference database of chest CT scans, the LIDC-IDRI data set. In LUNA16, participants develop their algorithm and upload their predictions on 888 CT scans in one of the two tracks: 1) the complete nodule detection track where a complete CAD system should be developed, or 2) the false positive reduction track where a provided set of nodule candidates should be classified. This paper describes the setup of LUNA16 and presents the results of the challenge so far. Moreover, the impact of combining individual systems on the detection performance was also investigated. It was observed that the leading solutions employed convolutional networks and used the provided set of nodule candidates. The combination of these solutions achieved an excellent sensitivity of over 95% at fewer than 1.0 false positives per scan. This highlights the potential of combining algorithms to improve the detection performance. Our observer study with four expert readers has shown that the best system detects nodules that were missed by expert readers who originally annotated the LIDC-IDRI data. We released this set of additional nodules for further development of CAD systems
Automated Pulmonary Nodule Detection: High Sensitivity With Few Candidates
Automated pulmonary nodule detection plays an important role in lung cancer diagnosis. In this paper, we propose a pulmonary detection framework that can achieve high sensitivity with few candidates. First, the Feature Pyramid Network (FPN), which leverages multi-level features, is applied to detect nodule candidates that cover almost all true positives. Then redundant candidates are removed by a simple but effective Conditional 3-Dimensional Non-Maximum Suppression (Conditional 3D-NMS). Moreover, a novel Attention 3D CNN (Attention 3D-CNN) which efficiently utilizes contextual information is proposed to further remove the overwhelming majority of false positives. The proposed method yields a sensitivity of 95.8% at 2 false positives per scan on the LUng Nodule Analysis 2016 (LUNA16) dataset, which is competitive compared to the current published state-of-the-art methods
Validation, comparison, and combination of algorithms for automatic detection of pulmonary nodules in computed tomography images: the LUNA16 challenge
Automatic detection of pulmonary nodules in thoracic computed tomography (CT) scans has been an active area of research for the last two decades. However, there have only been few studies that provide a comparative performance evaluation of different systems on a common database. We have therefore set up the LUNA16 challenge, an objective evaluation framework for automatic nodule detection algorithms using the largest publicly available reference database of chest CT scans, the LIDC-IDRI data set. In LUNA16, participants develop their algorithm and upload their predictions on 888 CT scans in one of the two tracks: 1) the complete nodule detection track where a complete CAD system should be developed, or 2) the false positive reduction track where a provided set of nodule candidates should be classified. This paper describes the setup of LUNA16 and presents the results of the challenge so far. Moreover, the impact of combining individual systems on the detection performance was also investigated. It was observed that the leading solutions employed convolutional networks and used the provided set of nodule candidates. The combination of these solutions achieved an excellent sensitivity of over 95% at fewer than 1.0 false positives per scan. This highlights the potential of combining algorithms to improve the detection performance. Our observer study with four expert readers has shown that the best system detects nodules that were missed by expert readers who originally annotated the LIDC-IDRI data. We released this set of additional nodules for further development of CAD system